pyalfe.containers#

class pyalfe.containers.Config[source]#

Bases: object

from_ini(ini_file)[source]#

from_dict(d)[source]#

class pyalfe.containers.DeclarativeContainer[source]#

Bases: object

init_resources()[source]#

This function exists for compatibility reasons

class pyalfe.containers.PipelineContainer[source]#

Bases: DeclarativeContainer

container objects for all the dependencies of the pipeline.

property pipeline_dir#

property image_processor#

property image_registration#

property skullstripping_model#

property flair_model#

property enhancement_model#

property tissue_model#

property initialization#

property skullstripping#

property t1_preprocessing#

property cross_modality_registration#

property flair_segmentation#

property enhancement_segmentation#

property tissue_segmentation#

property t1_postprocessing#

property t1_registration#

property resampling#

property quantification#

property pyalfe_pipeline_runner#

class pyalfe.containers.DicomProcessingContianer[source]#

Bases: DeclarativeContainer

Contianer for dicom processing pipeline depedencies

property pipeline_dir#

property dicom_dir#

property dicom_processing#

property dicom_processing_pipeline_runner#